MIPMET: Microbial Physiology and Metabolism Database

MIPMET is a database on MIcrobial Physiology and METabolism. The data is useful for studies on microbe–environment interactions from a metabolic network perspective. Currently, the data on physiology and metabolism for 1859 organisms are available. The data on metabolic networks for 1239 (67%) organisms (including 95 archaea, 1057 bacteria, and 87 eukaryotes) are available in the KEGG (Kyoto Encyclopedia of Genes and Genomes) database.

KEGG IDs for organisms you focus on
Search with species names (e.g., Escherichia coli; Thermotoga). eco; bsu; tma; tko; hla
Consider all organisms in the dataset (the above query is ignored).

Domain: Archaea Bacteria Eukaryotes

Habitat

Biotic

Trophic

Oxygen Requirement

Temperture to °C Optimal

Acidity (mainly for Archaea) pH = to Optimal

Salinity (mainly for Archaea) to M NaCl Optimal

Multicellularity (mainly for Eukaryotes)

Download the query result in CSV format.

Contact:
Kazuhiro Takemoto (takemoto[at]kyutech.ac.jp)